Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter nutrimenti |
| Strain | strain DSM 27372 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1672028 bp
Thymine Count
1662865 bp
Guanine Count
1202051 bp
Cytosine Count
1178159 bp
Genome Length
5716991 bp
Protein-coding Genes
4924 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| long-subunit fatty acid transport protein | B0O44_105107 | Not Available | Negative | 3503556 - 3505091 | 56356.1 |
| hypothetical protein | B0O44_105108 | Not Available | Negative | 3505115 - 3505987 | 31959.9 |
| prolyl-trna synthetase | B0O44_105109 | Not Available | Positive | 3506044 - 3507564 | 57718.5 |
| cystathionine gamma-lyase/cystathionine beta-lyase | B0O44_105110 | Not Available | Positive | 3507610 - 3508749 | 41737.1 |
| uncharacterized protein (tigr02757 family) | B0O44_105111 | Not Available | Positive | 3508756 - 3509619 | 33556.3 |
| bacteriocin resistance ydei/ompd-like protein | B0O44_105112 | Not Available | Positive | 3509634 - 3510140 | 19118.5 |
| dolichol-phosphate mannosyltransferase | B0O44_105113 | Not Available | Negative | 3510146 - 3510877 | 28168.4 |
| pot family proton-dependent oligopeptide transporter | B0O44_105114 | Not Available | Negative | 3510994 - 3512484 | 55592.3 |
| pot family proton-dependent oligopeptide transporter | B0O44_105115 | Not Available | Negative | 3512538 - 3514307 | 65515.8 |
| hypothetical protein | B0O44_105116 | Not Available | Negative | 3514537 - 3515523 | 37291.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

