Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter nutrimenti |
| Strain | strain DSM 27372 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1672028 bp
Thymine Count
1662865 bp
Guanine Count
1202051 bp
Cytosine Count
1178159 bp
Genome Length
5716991 bp
Protein-coding Genes
4924 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| l-amino acid n-acyltransferase ynca | B0O44_10597 | Not Available | Negative | 3493300 - 3493782 | 18572.2 |
| hypothetical protein | B0O44_10598 | Not Available | Negative | 3493779 - 3494468 | 26132.7 |
| uncharacterized protein duf4296 | B0O44_10599 | Not Available | Positive | 3494710 - 3495120 | 15640.3 |
| dna mismatch repair protein muts2 | B0O44_105100 | Not Available | Positive | 3495124 - 3497499 | 89647.9 |
| 3-oxoacid coa-transferase subunit a | B0O44_105101 | Not Available | Positive | 3497575 - 3498276 | 25430.6 |
| 3-oxoacid coa-transferase subunit b | B0O44_105102 | Not Available | Positive | 3498287 - 3498946 | 23312.6 |
| uridine kinase | B0O44_105103 | Not Available | Negative | 3498943 - 3499584 | 24651.5 |
| lysm repeat protein | B0O44_105104 | Not Available | Negative | 3499574 - 3500944 | 50347.1 |
| starvation-inducible dna-binding protein | B0O44_105105 | Not Available | Positive | 3501120 - 3501599 | 18567.3 |
| 4-hydroxy-3-polyprenylbenzoate decarboxylase | B0O44_105106 | Not Available | Positive | 3501700 - 3503511 | 67203.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

