Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter nutrimenti |
| Strain | strain DSM 27372 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1672028 bp
Thymine Count
1662865 bp
Guanine Count
1202051 bp
Cytosine Count
1178159 bp
Genome Length
5716991 bp
Protein-coding Genes
4924 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| polysaccharide lyase-like protein | B0O44_10577 | Not Available | Positive | 3473783 - 3474577 | 28996.3 |
| peptidoglycan/lps o-acetylase oafa/yrhl | B0O44_10578 | Not Available | Negative | 3474639 - 3475739 | 41129.4 |
| pimeloyl-acp methyl ester carboxylesterase | B0O44_10579 | Not Available | Positive | 3475936 - 3477573 | 61385.7 |
| hypothetical protein | B0O44_10580 | Not Available | Negative | 3477755 - 3478534 | 29499.5 |
| Trna-his | Not Available | Not Available | Positive | 3478786 - 3478861 | Not Available |
| 4-hydroxy-3-polyprenylbenzoate decarboxylase | B0O44_10582 | Not Available | Positive | 3479172 - 3479735 | 20681.0 |
| threonylcarbamoyladenosine trna methylthiotransferase mtab | B0O44_10583 | Not Available | Positive | 3479882 - 3481201 | 49214.0 |
| prolipoprotein diacylglyceryltransferase | B0O44_10584 | Not Available | Positive | 3481233 - 3482387 | 42854.0 |
| myo-inositol-1(or 4)-monophosphatase | B0O44_10585 | Not Available | Positive | 3482399 - 3483190 | 29836.7 |
| fe-s cluster biogenesis protein nfua | B0O44_10586 | Not Available | Negative | 3483674 - 3484222 | 20241.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

