Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter nutrimenti |
| Strain | strain DSM 27372 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1672028 bp
Thymine Count
1662865 bp
Guanine Count
1202051 bp
Cytosine Count
1178159 bp
Genome Length
5716991 bp
Protein-coding Genes
4924 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rna polymerase primary sigma factor | B0O44_10557 | Not Available | Negative | 3447471 - 3448331 | 32680.1 |
| hypothetical protein | B0O44_10558 | Not Available | Negative | 3448709 - 3449038 | 11926.9 |
| glyoxylase-like metal-dependent hydrolase (beta-lactamase superfamily ii) | B0O44_10559 | Not Available | Negative | 3449117 - 3449959 | 32179.6 |
| dihydrolipoamide dehydrogenase | B0O44_10560 | Not Available | Negative | 3450050 - 3451438 | 49072.3 |
| carboxypeptidase family protein | B0O44_10561 | Not Available | Positive | 3451770 - 3455084 | 121014.0 |
| uncharacterized protein duf3604 | B0O44_10562 | Not Available | Negative | 3455133 - 3457658 | 94789.5 |
| 2',3'-cyclic-nucleotide 2'-phosphodiesterase (5'-nucleotidase family) | B0O44_10563 | Not Available | Negative | 3457708 - 3459207 | 55754.5 |
| hypothetical protein | B0O44_10564 | Not Available | Positive | 3459514 - 3460143 | 23403.1 |
| phosphoribosylformylglycinamidine cyclo-ligase | B0O44_10565 | Not Available | Negative | 3460198 - 3461379 | 43506.9 |
| glutamine synthetase | B0O44_10566 | Not Available | Negative | 3461503 - 3463686 | 81520.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

