Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter nutrimenti |
| Strain | strain DSM 27372 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1672028 bp
Thymine Count
1662865 bp
Guanine Count
1202051 bp
Cytosine Count
1178159 bp
Genome Length
5716991 bp
Protein-coding Genes
4924 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glutamate synthase domain-containing protein 2 | B0O44_10547 | Not Available | Positive | 3435028 - 3436686 | 60764.2 |
| asparaginyl-trna synthetase | B0O44_10548 | Not Available | Negative | 3436757 - 3438205 | 55471.1 |
| succinyl-coa synthetase beta subunit | B0O44_10549 | Not Available | Negative | 3438733 - 3439944 | 43624.6 |
| lipoprotein-releasing system atp-binding protein | B0O44_10550 | Not Available | Positive | 3440188 - 3440838 | 23409.5 |
| hypothetical protein | B0O44_10551 | Not Available | Positive | 3440844 - 3441347 | 18354.1 |
| hypothetical protein | B0O44_10552 | Not Available | Positive | 3441347 - 3441961 | 24131.0 |
| c-terminal processing protease ctpa/prc | B0O44_10553 | Not Available | Positive | 3442085 - 3443716 | 58438.6 |
| peptidase m28-like protein | B0O44_10554 | Not Available | Negative | 3443753 - 3444694 | 35268.8 |
| voltage-dependent potassium channel beta subunit | B0O44_10555 | Not Available | Positive | 3444863 - 3445846 | 36852.6 |
| glyceraldehyde 3-phosphate dehydrogenase | B0O44_10556 | Not Available | Negative | 3445913 - 3447361 | 53595.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

