Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter nutrimenti |
| Strain | strain DSM 27372 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1672028 bp
Thymine Count
1662865 bp
Guanine Count
1202051 bp
Cytosine Count
1178159 bp
Genome Length
5716991 bp
Protein-coding Genes
4924 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative membrane protein | B0O44_10537 | Not Available | Positive | 3425888 - 3426481 | 21595.8 |
| hypothetical protein | B0O44_10538 | Not Available | Negative | 3426559 - 3427266 | 26821.4 |
| na+/proline symporter | B0O44_10539 | Not Available | Negative | 3427285 - 3428790 | 55844.2 |
| dna replication and repair protein recr | B0O44_10540 | Not Available | Positive | 3428992 - 3429636 | 24121.3 |
| short-subunit dehydrogenase | B0O44_10541 | Not Available | Positive | 3429662 - 3430477 | 29219.8 |
| anthranilate phosphoribosyltransferase | B0O44_10542 | Not Available | Positive | 3430699 - 3431688 | 35901.1 |
| phosphoribosylanthranilate isomerase | B0O44_10543 | Not Available | Positive | 3431693 - 3432313 | 23657.5 |
| tryptophan synthase beta chain | B0O44_10544 | Not Available | Positive | 3432344 - 3433525 | 43049.6 |
| tryptophan synthase alpha chain | B0O44_10545 | Not Available | Positive | 3433536 - 3434306 | 28259.1 |
| trna threonylcarbamoyl adenosine modification protein (sua5/ycio/yrdc/ywlc family) | B0O44_10546 | Not Available | Negative | 3434329 - 3434949 | 22913.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

