Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter nutrimenti |
| Strain | strain DSM 27372 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1672028 bp
Thymine Count
1662865 bp
Guanine Count
1202051 bp
Cytosine Count
1178159 bp
Genome Length
5716991 bp
Protein-coding Genes
4924 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Trna-leu | Not Available | Not Available | Positive | 3416724 - 3416811 | Not Available |
| Trna-gly | Not Available | Not Available | Positive | 3416858 - 3416933 | Not Available |
| regulatory protein | B0O44_10529 | Not Available | Negative | 3417066 - 3417554 | 18981.2 |
| type iv secretory pathway virj component | B0O44_10530 | Not Available | Positive | 3417662 - 3419098 | 52349.3 |
| hypothetical protein | B0O44_10531 | Not Available | Positive | 3419191 - 3419337 | 5587.98 |
| glutamate 5-kinase | B0O44_10532 | Not Available | Positive | 3419472 - 3420551 | 39000.4 |
| glutamate-5-semialdehyde dehydrogenase | B0O44_10533 | Not Available | Positive | 3420583 - 3421821 | 44901.7 |
| dna-binding iscr family transcriptional regulator | B0O44_10534 | Not Available | Positive | 3421888 - 3422298 | 14912.0 |
| hypothetical protein | B0O44_10535 | Not Available | Positive | 3422663 - 3423313 | 23562.1 |
| alanine racemase | B0O44_10536 | Not Available | Positive | 3423422 - 3425878 | 91537.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

