Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter nutrimenti |
| Strain | strain DSM 27372 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1672028 bp
Thymine Count
1662865 bp
Guanine Count
1202051 bp
Cytosine Count
1178159 bp
Genome Length
5716991 bp
Protein-coding Genes
4924 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| translation initiation factor if-3 | B0O44_101288 | Not Available | Positive | 356133 - 356702 | 21492.4 |
| large subunit ribosomal protein l35 | B0O44_101289 | Not Available | Positive | 356729 - 356929 | 7402.3 |
| lsu ribosomal protein l20p | B0O44_101290 | Not Available | Positive | 357004 - 357348 | 12998.0 |
| transcriptional regulator with xre-family hth domain | B0O44_101291 | Not Available | Negative | 357426 - 358202 | 29436.0 |
| putative endonuclease | B0O44_101292 | Not Available | Positive | 358337 - 358687 | 13590.7 |
| tol biopolymer transport system component | B0O44_101293 | Not Available | Negative | 358757 - 361900 | 117676.0 |
| penicillin-binding protein 1a | B0O44_101294 | Not Available | Negative | 361924 - 364380 | 93532.4 |
| abc-2 type transport system permease protein | B0O44_101295 | Not Available | Negative | 364741 - 365922 | 43852.2 |
| hlyd family secretion protein | B0O44_101296 | Not Available | Negative | 366178 - 367137 | 35218.7 |
| outer membrane protein tolc | B0O44_101297 | Not Available | Negative | 367176 - 368564 | 51586.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

