Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter nutrimenti |
| Strain | strain DSM 27372 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1672028 bp
Thymine Count
1662865 bp
Guanine Count
1202051 bp
Cytosine Count
1178159 bp
Genome Length
5716991 bp
Protein-coding Genes
4924 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Ncrna_class:autocatalytically_spliced_intron | Not Available | Not Available | Positive | 34197 - 34370 | Not Available |
| Ncrna_class:autocatalytically_spliced_intron | Not Available | Not Available | Positive | 34416 - 34518 | Not Available |
| Ncrna_class:autocatalytically_spliced_intron | Not Available | Not Available | Positive | 35983 - 36059 | Not Available |
| abc-type transport system involved in multi-copper enzyme maturation permease subunit | B0O44_10121 | Not Available | Negative | 33006 - 36551 | 134213.0 |
| abc-type multidrug transport system atpase subunit | B0O44_10122 | Not Available | Negative | 36545 - 37441 | 32545.5 |
| histidine kinase | B0O44_10123 | Not Available | Positive | 37632 - 39140 | 57791.1 |
| lyttr family two component transcriptional regulator | B0O44_10124 | Not Available | Positive | 39137 - 39859 | 27657.7 |
| hypothetical protein | B0O44_10125 | Not Available | Positive | 39947 - 40162 | 8086.7 |
| pare-like toxin of type ii parde toxin-antitoxin system | B0O44_10126 | Not Available | Positive | 40163 - 40468 | 11931.4 |
| crp-like camp-binding protein | B0O44_10127 | Not Available | Negative | 40521 - 41114 | 23351.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

