Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter nutrimenti |
| Strain | strain DSM 27372 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1672028 bp
Thymine Count
1662865 bp
Guanine Count
1202051 bp
Cytosine Count
1178159 bp
Genome Length
5716991 bp
Protein-coding Genes
4924 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| photosystem ii stability/assembly factor-like uncharacterized protein | B0O44_1057 | Not Available | Positive | 3396352 - 3397371 | 37143.0 |
| glucose/sorbosone dehydrogenase | B0O44_1058 | Not Available | Positive | 3397533 - 3398813 | 46716.6 |
| mono/diheme cytochrome c family protein | B0O44_1059 | Not Available | Positive | 3398876 - 3399301 | 15394.8 |
| glycosyl hydrolase family 28 | B0O44_10510 | Not Available | Positive | 3399329 - 3400855 | 55457.1 |
| glycosyl hydrolase family 97 | B0O44_10511 | Not Available | Negative | 3400914 - 3403055 | 80594.5 |
| nicotinate phosphoribosyltransferase | B0O44_10512 | Not Available | Negative | 3403174 - 3404370 | 46161.8 |
| doxx-like protein | B0O44_10513 | Not Available | Positive | 3404518 - 3404892 | 13687.4 |
| helix-turn-helix protein | B0O44_10514 | Not Available | Positive | 3405011 - 3405823 | 31182.7 |
| glyoxalase/bleomycin resistance protein/dioxygenase superfamily protein | B0O44_10515 | Not Available | Positive | 3405890 - 3406360 | 18470.2 |
| aclacinomycin oxidase | B0O44_10516 | Not Available | Positive | 3406527 - 3408014 | 55188.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

