Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter nutrimenti |
| Strain | strain DSM 27372 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1672028 bp
Thymine Count
1662865 bp
Guanine Count
1202051 bp
Cytosine Count
1178159 bp
Genome Length
5716991 bp
Protein-coding Genes
4924 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| peptidase s41-like protein | B0O44_104685 | Not Available | Negative | 3386328 - 3387731 | 53635.7 |
| alpha-l-fucosidase | B0O44_104686 | Not Available | Negative | 3388095 - 3389417 | 50597.3 |
| subtilase family protein | B0O44_104687 | Not Available | Negative | 3389476 - 3391236 | 65536.0 |
| hypothetical protein | B0O44_104688 | Not Available | Positive | 3391243 - 3391518 | 10308.8 |
| hypothetical protein | B0O44_1051 | Not Available | Positive | 3391712 - 3392002 | 10694.5 |
| ipt/tig domain-containing protein | B0O44_1052 | Not Available | Positive | 3392020 - 3394236 | 77503.6 |
| uncharacterized membrane protein yccf (duf307 family) | B0O44_1053 | Not Available | Positive | 3394351 - 3394719 | 13446.1 |
| phnb protein | B0O44_1054 | Not Available | Negative | 3394729 - 3395160 | 16157.2 |
| dinb family protein | B0O44_1055 | Not Available | Negative | 3395174 - 3395680 | 19433.6 |
| uncharacterized protein duf2147 | B0O44_1056 | Not Available | Positive | 3395921 - 3396352 | 16212.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

