Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter nutrimenti |
| Strain | strain DSM 27372 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1672028 bp
Thymine Count
1662865 bp
Guanine Count
1202051 bp
Cytosine Count
1178159 bp
Genome Length
5716991 bp
Protein-coding Genes
4924 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| parb family chromosome partitioning protein | B0O44_104655 | Not Available | Negative | 3351190 - 3352110 | 34330.4 |
| chromosome partitioning protein | B0O44_104656 | Not Available | Negative | 3352121 - 3352924 | 29488.8 |
| nad(p)h-dependent fmn reductase | B0O44_104657 | Not Available | Positive | 3353107 - 3353628 | 19773.0 |
| iron complex transport system substrate-binding protein | B0O44_104658 | Not Available | Negative | 3353625 - 3354080 | 16937.6 |
| peptide/nickel transport system substrate-binding protein | B0O44_104659 | Not Available | Positive | 3354166 - 3355788 | 61833.1 |
| outer membrane receptor protein involved in fe transport | B0O44_104660 | Not Available | Negative | 3355844 - 3358249 | 86862.0 |
| leucyl-trna synthetase | B0O44_104661 | Not Available | Negative | 3358682 - 3361489 | 107460.0 |
| hypothetical protein | B0O44_104662 | Not Available | Negative | 3361629 - 3362051 | 15222.2 |
| cell division transport system permease protein | B0O44_104663 | Not Available | Positive | 3362291 - 3363169 | 32480.6 |
| hypothetical protein | B0O44_104664 | Not Available | Positive | 3363169 - 3363393 | 8293.58 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

