Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter nutrimenti |
| Strain | strain DSM 27372 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1672028 bp
Thymine Count
1662865 bp
Guanine Count
1202051 bp
Cytosine Count
1178159 bp
Genome Length
5716991 bp
Protein-coding Genes
4924 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| large subunit ribosomal protein l28 | B0O44_104645 | Not Available | Positive | 3342717 - 3342950 | 8884.0 |
| large subunit ribosomal protein l33 | B0O44_104646 | Not Available | Positive | 3342990 - 3343172 | 6956.69 |
| uncharacterized protein duf4295 | B0O44_104647 | Not Available | Positive | 3343211 - 3343378 | 6005.37 |
| fused signal recognition particle receptor | B0O44_104648 | Not Available | Positive | 3343451 - 3344413 | 34754.9 |
| ssu ribosomal protein s12p methylthiotransferase | B0O44_104649 | Not Available | Positive | 3344470 - 3345804 | 50487.4 |
| bacillithiol biosynthesis cysteine-adding enzyme bshc | B0O44_104650 | Not Available | Positive | 3345851 - 3347440 | 60636.7 |
| ldh2 family malate/lactate/ureidoglycolate dehydrogenase | B0O44_104651 | Not Available | Positive | 3347453 - 3348538 | 38801.4 |
| signal peptidase i | B0O44_104652 | Not Available | Negative | 3348550 - 3349749 | 45989.1 |
| dihydrodipicolinate reductase | B0O44_104653 | Not Available | Negative | 3349758 - 3350498 | 27663.8 |
| hypothetical protein | B0O44_104654 | Not Available | Negative | 3350558 - 3351190 | 23069.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

