Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter nutrimenti |
| Strain | strain DSM 27372 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1672028 bp
Thymine Count
1662865 bp
Guanine Count
1202051 bp
Cytosine Count
1178159 bp
Genome Length
5716991 bp
Protein-coding Genes
4924 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| arac-like dna-binding protein | B0O44_104635 | Not Available | Positive | 3330249 - 3331337 | 42047.1 |
| uncharacterized protein duf4932 | B0O44_104636 | Not Available | Positive | 3331445 - 3332599 | 43735.5 |
| lipid-a-disaccharide synthase | B0O44_104637 | Not Available | Negative | 3332596 - 3333705 | 41555.1 |
| hypothetical protein | B0O44_104638 | Not Available | Negative | 3333705 - 3333971 | 10067.7 |
| 5'-nucleotidase /3'-nucleotidase /exopolyphosphatase | B0O44_104639 | Not Available | Negative | 3333964 - 3334743 | 28565.0 |
| putative zn-dependent peptidase | B0O44_104640 | Not Available | Positive | 3334954 - 3337887 | 109869.0 |
| c-terminal processing protease ctpa/prc | B0O44_104641 | Not Available | Positive | 3338110 - 3339477 | 52216.8 |
| uncharacterized protein yjbj (upf0337 family) | B0O44_104642 | Not Available | Negative | 3339518 - 3339709 | 7304.75 |
| hypothetical protein | B0O44_104643 | Not Available | Positive | 3339825 - 3340511 | 25604.5 |
| acetyl-coa synthetase | B0O44_104644 | Not Available | Negative | 3340582 - 3342480 | 70322.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

