Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter nutrimenti |
| Strain | strain DSM 27372 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1672028 bp
Thymine Count
1662865 bp
Guanine Count
1202051 bp
Cytosine Count
1178159 bp
Genome Length
5716991 bp
Protein-coding Genes
4924 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tonb-linked susc/raga family outer membrane protein | B0O44_104625 | Not Available | Negative | 3315254 - 3318691 | 125649.0 |
| fecr family protein | B0O44_104626 | Not Available | Negative | 3318798 - 3319817 | 37971.2 |
| rna polymerase sigma-70 factor (ecf subfamily) | B0O44_104627 | Not Available | Negative | 3319898 - 3320467 | 22015.7 |
| glpgli family protein | B0O44_104628 | Not Available | Positive | 3320662 - 3321594 | 34712.7 |
| carboxypeptidase family protein | B0O44_104629 | Not Available | Positive | 3321591 - 3324260 | 99758.4 |
| blar1 peptidase m56 | B0O44_104630 | Not Available | Negative | 3324250 - 3325722 | 55793.7 |
| putative transcriptional regulator | B0O44_104631 | Not Available | Negative | 3325728 - 3326090 | 14055.0 |
| lyttr family two component transcriptional regulator | B0O44_104632 | Not Available | Negative | 3326173 - 3326874 | 26715.7 |
| histidine kinase | B0O44_104633 | Not Available | Negative | 3326910 - 3328583 | 63988.5 |
| cubico group peptidase (beta-lactamase class c family) | B0O44_104634 | Not Available | Positive | 3328749 - 3330158 | 53210.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

