Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter nutrimenti |
| Strain | strain DSM 27372 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1672028 bp
Thymine Count
1662865 bp
Guanine Count
1202051 bp
Cytosine Count
1178159 bp
Genome Length
5716991 bp
Protein-coding Genes
4924 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uncharacterized lipoprotein yddw (upf0748 family) | B0O44_104605 | Not Available | Negative | 3293108 - 3294652 | 59037.8 |
| peptidase m23-like protein | B0O44_104606 | Not Available | Negative | 3294881 - 3295525 | 24962.5 |
| adenylate kinase family enzyme | B0O44_104607 | Not Available | Negative | 3295538 - 3296083 | 20972.1 |
| hypothetical protein | B0O44_104608 | Not Available | Positive | 3296357 - 3296593 | 8909.93 |
| dna-binding response ompr family regulator | B0O44_104609 | Not Available | Positive | 3296608 - 3297282 | 25957.5 |
| signal transduction histidine kinase | B0O44_104610 | Not Available | Positive | 3297284 - 3298609 | 50574.0 |
| heat shock protein hslj | B0O44_104611 | Not Available | Negative | 3298614 - 3299318 | 26718.5 |
| uncharacterized protein duf695 | B0O44_104612 | Not Available | Positive | 3299571 - 3300662 | 42628.5 |
| carboxypeptidase-like protein | B0O44_104613 | Not Available | Negative | 3300875 - 3303337 | 93478.8 |
| hypothetical protein | B0O44_104614 | Not Available | Negative | 3303767 - 3303904 | 5607.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

