Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter nutrimenti |
| Strain | strain DSM 27372 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1672028 bp
Thymine Count
1662865 bp
Guanine Count
1202051 bp
Cytosine Count
1178159 bp
Genome Length
5716991 bp
Protein-coding Genes
4924 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 5-(carboxyamino)imidazole ribonucleotide mutase | B0O44_101278 | Not Available | Negative | 342064 - 342555 | 17254.2 |
| 5-(carboxyamino)imidazole ribonucleotide synthase | B0O44_101279 | Not Available | Negative | 342557 - 343696 | 42769.4 |
| hypothetical protein | B0O44_101280 | Not Available | Positive | 343753 - 344943 | 43889.1 |
| imidazolonepropionase-like amidohydrolase | B0O44_101281 | Not Available | Negative | 344961 - 348278 | 123123.0 |
| atp-dependent dna helicase recq | B0O44_101282 | Not Available | Positive | 348404 - 350296 | 71772.9 |
| putative autotransporter adhesin-like protein | B0O44_101283 | Not Available | Positive | 350325 - 351035 | 25589.1 |
| umf1 family mfs transporter | B0O44_101284 | Not Available | Positive | 351071 - 352393 | 49034.6 |
| l-lactate dehydrogenase complex protein llde | B0O44_101285 | Not Available | Positive | 352407 - 353144 | 27499.9 |
| glpgli family protein | B0O44_101286 | Not Available | Positive | 353267 - 354103 | 30553.6 |
| ser-trna(thr) hydrolase /threonyl-trna synthetase | B0O44_101287 | Not Available | Positive | 354194 - 356119 | 73208.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

