Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter nutrimenti |
| Strain | strain DSM 27372 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1672028 bp
Thymine Count
1662865 bp
Guanine Count
1202051 bp
Cytosine Count
1178159 bp
Genome Length
5716991 bp
Protein-coding Genes
4924 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| spfh domain/band 7 family protein | B0O44_104585 | Not Available | Negative | 3265299 - 3266153 | 31605.7 |
| prolipoprotein diacylglyceryl transferase | B0O44_104586 | Not Available | Negative | 3266228 - 3267031 | 30678.4 |
| hypothetical protein | B0O44_104587 | Not Available | Positive | 3267421 - 3267915 | 18883.5 |
| alkaline phosphatase | B0O44_104588 | Not Available | Negative | 3267972 - 3269876 | 70309.7 |
| putative outer membrane starch-binding protein | B0O44_104589 | Not Available | Negative | 3269946 - 3271469 | 57020.1 |
| tonb-linked susc/raga family outer membrane protein | B0O44_104590 | Not Available | Negative | 3271497 - 3274892 | 123319.0 |
| fecr family protein | B0O44_104591 | Not Available | Negative | 3275024 - 3275977 | 35982.7 |
| rna polymerase sigma-70 factor (ecf subfamily) | B0O44_104592 | Not Available | Negative | 3276041 - 3276556 | 20020.4 |
| muts-like protein | B0O44_104593 | Not Available | Negative | 3276735 - 3278405 | 62779.9 |
| cubico group peptidase (beta-lactamase class c family) | B0O44_104594 | Not Available | Positive | 3278509 - 3279606 | 41176.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

