Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter nutrimenti |
| Strain | strain DSM 27372 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1672028 bp
Thymine Count
1662865 bp
Guanine Count
1202051 bp
Cytosine Count
1178159 bp
Genome Length
5716991 bp
Protein-coding Genes
4924 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rna polymerase sigma-70 factor (ecf subfamily) | B0O44_104565 | Not Available | Negative | 3245273 - 3245857 | 22483.3 |
| dihydrodipicolinate reductase | B0O44_104566 | Not Available | Negative | 3245943 - 3246743 | 28614.5 |
| c-terminal processing protease ctpa/prc | B0O44_104567 | Not Available | Negative | 3246844 - 3248622 | 67756.0 |
| ghkl domain-containing protein | B0O44_104568 | Not Available | Positive | 3248822 - 3249862 | 39977.7 |
| lyttr family two component transcriptional regulator | B0O44_104569 | Not Available | Positive | 3249859 - 3250578 | 27380.6 |
| caax prenyl protease-like protein | B0O44_104570 | Not Available | Negative | 3250628 - 3251329 | 27245.3 |
| tonb family protein | B0O44_104571 | Not Available | Negative | 3251350 - 3252057 | 26906.3 |
| hypothetical protein | B0O44_104572 | Not Available | Negative | 3252135 - 3252647 | 19976.6 |
| patatin-like phospholipase | B0O44_104573 | Not Available | Negative | 3252683 - 3254518 | 69943.7 |
| hypothetical protein | B0O44_104574 | Not Available | Positive | 3254648 - 3255262 | 23903.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

