Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter nutrimenti |
| Strain | strain DSM 27372 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1672028 bp
Thymine Count
1662865 bp
Guanine Count
1202051 bp
Cytosine Count
1178159 bp
Genome Length
5716991 bp
Protein-coding Genes
4924 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dtdp-4-amino-4,6-dideoxygalactose transaminase | B0O44_104555 | Not Available | Positive | 3232041 - 3233168 | 41661.4 |
| peptidoglycan/lps o-acetylase oafa/yrhl | B0O44_104556 | Not Available | Negative | 3233165 - 3234274 | 41752.3 |
| hypothetical protein | B0O44_104557 | Not Available | Positive | 3234440 - 3234853 | 15078.2 |
| hypothetical protein | B0O44_104558 | Not Available | Negative | 3234962 - 3235282 | 12325.9 |
| hypothetical protein | B0O44_104559 | Not Available | Negative | 3235294 - 3236616 | 46784.1 |
| hypothetical protein | B0O44_104560 | Not Available | Negative | 3236653 - 3237978 | 46930.4 |
| hypothetical protein | B0O44_104561 | Not Available | Negative | 3238058 - 3238969 | 33387.2 |
| hypothetical protein | B0O44_104562 | Not Available | Negative | 3238975 - 3240543 | 56620.5 |
| tonb-dependent receptor | B0O44_104563 | Not Available | Negative | 3240570 - 3243983 | 127654.0 |
| fecr family protein | B0O44_104564 | Not Available | Negative | 3244092 - 3245099 | 38264.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

