Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter nutrimenti |
| Strain | strain DSM 27372 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1672028 bp
Thymine Count
1662865 bp
Guanine Count
1202051 bp
Cytosine Count
1178159 bp
Genome Length
5716991 bp
Protein-coding Genes
4924 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 5-methylcytosine-specific restriction protein a | B0O44_104525 | Not Available | Negative | 3201248 - 3202054 | 31266.5 |
| hypothetical protein | B0O44_104526 | Not Available | Negative | 3202637 - 3203176 | 20848.9 |
| hypothetical protein | B0O44_104527 | Not Available | Negative | 3203623 - 3204138 | 19787.3 |
| uncharacterized protein duf805 | B0O44_104528 | Not Available | Positive | 3204421 - 3204723 | 11426.6 |
| hypothetical protein | B0O44_104529 | Not Available | Positive | 3204739 - 3204864 | 4909.91 |
| hypothetical protein | B0O44_104530 | Not Available | Negative | 3204845 - 3205096 | 9310.85 |
| nadp-dependent 3-hydroxy acid dehydrogenase ydfg | B0O44_104531 | Not Available | Positive | 3205472 - 3206485 | 36603.7 |
| arac-like dna-binding protein | B0O44_104532 | Not Available | Positive | 3206528 - 3207343 | 31737.6 |
| rimj/riml family protein n-acetyltransferase | B0O44_104533 | Not Available | Positive | 3207467 - 3207952 | 18366.0 |
| hypothetical protein | B0O44_104534 | Not Available | Negative | 3207967 - 3208242 | 9755.47 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

