Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter nutrimenti |
| Strain | strain DSM 27372 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1672028 bp
Thymine Count
1662865 bp
Guanine Count
1202051 bp
Cytosine Count
1178159 bp
Genome Length
5716991 bp
Protein-coding Genes
4924 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rhs repeat-associated protein | B0O44_104515 | Not Available | Negative | 3183258 - 3186650 | 124680.0 |
| hypothetical protein | B0O44_104516 | Not Available | Negative | 3186662 - 3189889 | 120392.0 |
| hypothetical protein | B0O44_104517 | Not Available | Negative | 3189901 - 3190815 | 34226.1 |
| tonb-dependent susc/raga subfamily outer membrane receptor | B0O44_104518 | Not Available | Negative | 3191082 - 3192326 | 45866.2 |
| beta-lactamase superfamily ii metal-dependent hydrolase | B0O44_104519 | Not Available | Negative | 3193544 - 3194533 | 37844.7 |
| hypothetical protein | B0O44_104520 | Not Available | Negative | 3194538 - 3195260 | 27810.1 |
| histidine kinase/dna gyrase b/hsp90-like atpase | B0O44_104521 | Not Available | Negative | 3195263 - 3197977 | 104433.0 |
| ecorii-like protein | B0O44_104522 | Not Available | Negative | 3198018 - 3199238 | 46606.5 |
| dna (cytosine-5)-methyltransferase 1 | B0O44_104523 | Not Available | Negative | 3199240 - 3200487 | 47254.4 |
| t/g mismatch-specific endonuclease | B0O44_104524 | Not Available | Negative | 3200627 - 3201049 | 16313.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

