Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter nutrimenti |
| Strain | strain DSM 27372 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1672028 bp
Thymine Count
1662865 bp
Guanine Count
1202051 bp
Cytosine Count
1178159 bp
Genome Length
5716991 bp
Protein-coding Genes
4924 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transglutaminase superfamily protein | B0O44_101268 | Not Available | Negative | 330985 - 332961 | 75427.3 |
| dna polymerase-3 subunit epsilon | B0O44_101269 | Not Available | Positive | 333154 - 334119 | 36870.9 |
| hypothetical protein | B0O44_101270 | Not Available | Positive | 334123 - 335991 | 70534.5 |
| epoxyqueuosine reductase | B0O44_101271 | Not Available | Negative | 336005 - 336943 | 36143.5 |
| hypothetical protein | B0O44_101272 | Not Available | Positive | 337020 - 337223 | 7887.45 |
| putative amidohydrolase | B0O44_101273 | Not Available | Negative | 337227 - 338735 | 57650.2 |
| holliday junction dna helicase subunit ruvb | B0O44_101274 | Not Available | Negative | 338782 - 339804 | 37741.3 |
| 3-hydroxybutyryl-coa dehydrogenase | B0O44_101275 | Not Available | Negative | 339831 - 340688 | 31000.8 |
| pyridoxamine 5'-phosphate oxidase | B0O44_101276 | Not Available | Negative | 340741 - 341391 | 24616.8 |
| putative transcriptional regulator | B0O44_101277 | Not Available | Positive | 341441 - 342004 | 21160.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

