Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter nutrimenti |
| Strain | strain DSM 27372 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1672028 bp
Thymine Count
1662865 bp
Guanine Count
1202051 bp
Cytosine Count
1178159 bp
Genome Length
5716991 bp
Protein-coding Genes
4924 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative mate family efflux protein | B0O44_104495 | Not Available | Negative | 3163803 - 3165140 | 48591.9 |
| abc-2 type transport system permease protein | B0O44_104496 | Not Available | Negative | 3165137 - 3166564 | 53257.4 |
| abc-2 type transport system permease protein | B0O44_104497 | Not Available | Negative | 3166561 - 3167967 | 53292.5 |
| outer membrane receptor protein involved in fe transport | B0O44_104498 | Not Available | Negative | 3167979 - 3170114 | 80211.9 |
| abc-2 type transport system atp-binding protein | B0O44_104499 | Not Available | Negative | 3170111 - 3170806 | 25685.3 |
| uncharacterized protein duf4374 | B0O44_104500 | Not Available | Negative | 3170814 - 3172001 | 41658.2 |
| outer membrane cobalamin receptor | B0O44_104501 | Not Available | Negative | 3172011 - 3174125 | 79244.6 |
| hypothetical protein | B0O44_104502 | Not Available | Negative | 3174149 - 3175069 | 35160.2 |
| hypothetical protein | B0O44_104503 | Not Available | Negative | 3175069 - 3175539 | 18768.3 |
| hypothetical protein | B0O44_104504 | Not Available | Positive | 3175951 - 3176805 | 32526.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

