Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter nutrimenti |
| Strain | strain DSM 27372 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1672028 bp
Thymine Count
1662865 bp
Guanine Count
1202051 bp
Cytosine Count
1178159 bp
Genome Length
5716991 bp
Protein-coding Genes
4924 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | B0O44_104455 | Not Available | Positive | 3120639 - 3121871 | 45580.1 |
| uncharacterized protein duf4249 | B0O44_104456 | Not Available | Negative | 3121923 - 3122768 | 32184.5 |
| tonb-dependent receptor-like protein | B0O44_104457 | Not Available | Negative | 3122765 - 3125155 | 90302.7 |
| rna polymerase sigma-70 factor (ecf subfamily) | B0O44_104458 | Not Available | Positive | 3125296 - 3125892 | 23364.8 |
| hypothetical protein | B0O44_104459 | Not Available | Positive | 3125903 - 3126178 | 10868.2 |
| threonine/homoserine efflux transporter rhta | B0O44_104460 | Not Available | Positive | 3126432 - 3127325 | 32558.2 |
| glycine betaine/proline transport system substrate-binding protein | B0O44_104461 | Not Available | Negative | 3127373 - 3128239 | 31482.2 |
| glycine betaine/proline transport system permease protein | B0O44_104462 | Not Available | Negative | 3128245 - 3129069 | 29655.8 |
| glycine betaine/proline transport system atp-binding protein | B0O44_104463 | Not Available | Negative | 3129073 - 3130311 | 45503.6 |
| pas domain s-box-containing protein | B0O44_104464 | Not Available | Negative | 3130612 - 3132594 | 73442.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

