Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter nutrimenti |
| Strain | strain DSM 27372 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1672028 bp
Thymine Count
1662865 bp
Guanine Count
1202051 bp
Cytosine Count
1178159 bp
Genome Length
5716991 bp
Protein-coding Genes
4924 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tfp pilus assembly protein pilf | B0O44_104445 | Not Available | Negative | 3111478 - 3113109 | 62610.3 |
| carbonic anhydrase | B0O44_104446 | Not Available | Negative | 3113183 - 3113950 | 27518.8 |
| hypothetical protein | B0O44_104447 | Not Available | Negative | 3113943 - 3114242 | 11795.2 |
| hypothetical protein | B0O44_104448 | Not Available | Negative | 3114343 - 3114657 | 12037.6 |
| uncharacterized protein duf4397 | B0O44_104449 | Not Available | Negative | 3115132 - 3115848 | 24975.9 |
| hypothetical protein | B0O44_104450 | Not Available | Negative | 3116060 - 3116407 | 13331.1 |
| bacteriocin resistance ydei/ompd-like protein | B0O44_104451 | Not Available | Negative | 3116598 - 3117071 | 17953.1 |
| fad dependent oxidoreductase tigr03364 | B0O44_104452 | Not Available | Negative | 3117151 - 3118305 | 44165.2 |
| hypothetical protein | B0O44_104453 | Not Available | Negative | 3118332 - 3119663 | 50352.1 |
| phosphonatase-like hydrolase | B0O44_104454 | Not Available | Negative | 3119671 - 3120348 | 25291.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

