Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter nutrimenti |
| Strain | strain DSM 27372 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1672028 bp
Thymine Count
1662865 bp
Guanine Count
1202051 bp
Cytosine Count
1178159 bp
Genome Length
5716991 bp
Protein-coding Genes
4924 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| stearoyl-coa desaturase (delta-9 desaturase) | B0O44_104435 | Not Available | Negative | 3095744 - 3096481 | 29825.2 |
| mannose-6-phosphate isomerase type 2 | B0O44_104436 | Not Available | Negative | 3096639 - 3097136 | 18729.9 |
| two-component system alkaline phosphatase synthesis response regulator phop | B0O44_104437 | Not Available | Negative | 3097180 - 3097551 | 13902.8 |
| permuted papain-like amidase yaef/yiix c92 family enzyme | B0O44_104438 | Not Available | Positive | 3097707 - 3098342 | 24190.1 |
| uncharacterized protein duf1338 | B0O44_104439 | Not Available | Negative | 3098376 - 3099272 | 33851.0 |
| hydroxylysine kinase /5-phosphonooxy-l-lysine phospho-lyase | B0O44_104440 | Not Available | Negative | 3099293 - 3101578 | 85541.9 |
| trehalase | B0O44_104441 | Not Available | Negative | 3101575 - 3103536 | 73998.4 |
| beta-galactosidase | B0O44_104442 | Not Available | Negative | 3103541 - 3106657 | 118520.0 |
| putative outer membrane starch-binding protein | B0O44_104443 | Not Available | Negative | 3106697 - 3108211 | 57061.0 |
| tonb-linked susc/raga family outer membrane protein | B0O44_104444 | Not Available | Negative | 3108230 - 3111337 | 113674.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

