Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter nutrimenti |
| Strain | strain DSM 27372 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1672028 bp
Thymine Count
1662865 bp
Guanine Count
1202051 bp
Cytosine Count
1178159 bp
Genome Length
5716991 bp
Protein-coding Genes
4924 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| topoisomerase-4 subunit b | B0O44_104405 | Not Available | Negative | 3060329 - 3062233 | 72004.7 |
| gph family glycoside/pentoside/hexuronide:cation symporter | B0O44_104406 | Not Available | Positive | 3062379 - 3063716 | 49342.7 |
| atp-dependent rna helicase rhle | B0O44_104407 | Not Available | Positive | 3063791 - 3065143 | 49224.8 |
| pas domain s-box-containing protein | B0O44_104408 | Not Available | Positive | 3065292 - 3066947 | 62447.3 |
| 3',5'-cyclic-nucleotide phosphodiesterase | B0O44_104409 | Not Available | Negative | 3066916 - 3067878 | 35288.0 |
| xaa-pro aminopeptidase | B0O44_104410 | Not Available | Negative | 3067935 - 3069332 | 51573.8 |
| hypothetical protein | B0O44_104411 | Not Available | Negative | 3069582 - 3069797 | 8144.65 |
| hypothetical protein | B0O44_104412 | Not Available | Negative | 3069832 - 3070095 | 10092.7 |
| hypothetical protein | B0O44_104413 | Not Available | Negative | 3070628 - 3071302 | 25197.6 |
| hypothetical protein | B0O44_104414 | Not Available | Negative | 3071468 - 3071920 | 17008.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

