Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter nutrimenti |
| Strain | strain DSM 27372 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1672028 bp
Thymine Count
1662865 bp
Guanine Count
1202051 bp
Cytosine Count
1178159 bp
Genome Length
5716991 bp
Protein-coding Genes
4924 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phosphoribosylformylglycinamidine synthase | B0O44_101259 | Not Available | Negative | 318686 - 322348 | 134374.0 |
| hypothetical protein | B0O44_101260 | Not Available | Positive | 322482 - 323069 | 22191.5 |
| aminodeoxyfutalosine synthase | B0O44_101261 | Not Available | Positive | 323173 - 324366 | 46264.2 |
| putative phosphoglycerate mutase | B0O44_101262 | Not Available | Positive | 324366 - 325001 | 23958.3 |
| chorismate dehydratase | B0O44_101263 | Not Available | Positive | 324988 - 325716 | 27247.9 |
| Ncrna_class:rnase_p_rna | Not Available | Not Available | Positive | 325600 - 325972 | Not Available |
| dna mismatch repair protein muts | B0O44_101264 | Not Available | Positive | 325809 - 328418 | 98153.2 |
| lipoprotein spr/probable lipoprotein nlpc | B0O44_101265 | Not Available | Positive | 328423 - 328950 | 19272.4 |
| hypothetical protein | B0O44_101266 | Not Available | Positive | 328963 - 329088 | 4816.19 |
| transglutaminase-like putative cysteine protease | B0O44_101267 | Not Available | Negative | 329081 - 330988 | 72990.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

