Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter nutrimenti |
| Strain | strain DSM 27372 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1672028 bp
Thymine Count
1662865 bp
Guanine Count
1202051 bp
Cytosine Count
1178159 bp
Genome Length
5716991 bp
Protein-coding Genes
4924 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| outer membrane receptor for ferrienterochelin and colicins | B0O44_104395 | Not Available | Negative | 3039065 - 3041371 | 85056.1 |
| hypothetical protein | B0O44_104396 | Not Available | Positive | 3041518 - 3042588 | 40423.4 |
| hupe/urej protein | B0O44_104397 | Not Available | Positive | 3042760 - 3043347 | 22152.0 |
| yvtn family beta-propeller protein | B0O44_104398 | Not Available | Positive | 3043424 - 3045871 | 89302.7 |
| topoisomerase-4 subunit a | B0O44_104399 | Not Available | Negative | 3045868 - 3048906 | 113370.0 |
| cytidine deaminase | B0O44_104400 | Not Available | Negative | 3049067 - 3049555 | 17496.0 |
| uncharacterized protein duf490 | B0O44_104401 | Not Available | Positive | 3049686 - 3054812 | 189125.0 |
| outer membrane protein assembly factor bama | B0O44_104402 | Not Available | Positive | 3054796 - 3057111 | 87180.7 |
| membrane protein | B0O44_104403 | Not Available | Positive | 3057121 - 3058092 | 35676.4 |
| phospho-acceptor domain-containing protein | B0O44_104404 | Not Available | Negative | 3058100 - 3060223 | 79831.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

