Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter nutrimenti |
| Strain | strain DSM 27372 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1672028 bp
Thymine Count
1662865 bp
Guanine Count
1202051 bp
Cytosine Count
1178159 bp
Genome Length
5716991 bp
Protein-coding Genes
4924 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | B0O44_104385 | Not Available | Negative | 3029968 - 3030615 | 23360.7 |
| nad(p)h-dependent fmn reductase | B0O44_104386 | Not Available | Negative | 3030865 - 3031398 | 19597.6 |
| phospholipid/cholesterol/gamma-hch transport system permease protein | B0O44_104387 | Not Available | Positive | 3031573 - 3032307 | 25838.4 |
| phospholipid/cholesterol/gamma-hch transport system atp-binding protein | B0O44_104388 | Not Available | Positive | 3032304 - 3033056 | 28356.4 |
| 23s rrna (cytosine1962-c5)-methyltransferase | B0O44_104389 | Not Available | Positive | 3033063 - 3033962 | 34275.2 |
| putative hemin transport protein | B0O44_104390 | Not Available | Negative | 3034070 - 3035098 | 38186.6 |
| iron complex transport system atp-binding protein | B0O44_104391 | Not Available | Negative | 3035171 - 3035953 | 29000.5 |
| iron complex transport system permease protein | B0O44_104392 | Not Available | Negative | 3035950 - 3036999 | 36829.1 |
| iron complex transport system substrate-binding protein | B0O44_104393 | Not Available | Negative | 3036996 - 3037856 | 30086.1 |
| heme-binding hmuy-like protein | B0O44_104394 | Not Available | Negative | 3037960 - 3039027 | 37758.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

