Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter nutrimenti |
| Strain | strain DSM 27372 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1672028 bp
Thymine Count
1662865 bp
Guanine Count
1202051 bp
Cytosine Count
1178159 bp
Genome Length
5716991 bp
Protein-coding Genes
4924 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | B0O44_104335 | Not Available | Negative | 2975762 - 2976886 | 43071.4 |
| putative membrane protein | B0O44_104336 | Not Available | Negative | 2976890 - 2977429 | 20987.7 |
| uroporphyrinogen decarboxylase | B0O44_104337 | Not Available | Negative | 2977433 - 2978455 | 37888.2 |
| hypothetical protein | B0O44_104338 | Not Available | Negative | 2978474 - 2978989 | 19711.0 |
| two-component system alkaline phosphatase synthesis response regulator phop | B0O44_104339 | Not Available | Negative | 2978993 - 2979697 | 27337.4 |
| phospho-acceptor domain-containing protein | B0O44_104340 | Not Available | Negative | 2979703 - 2980569 | 32262.3 |
| glutamate-1-semialdehyde 2,1-aminomutase | B0O44_104341 | Not Available | Negative | 2980602 - 2981954 | 49057.7 |
| porphobilinogen synthase | B0O44_104342 | Not Available | Negative | 2981977 - 2982945 | 35749.2 |
| hydroxymethylbilane synthase | B0O44_104343 | Not Available | Negative | 2982965 - 2984545 | 58734.5 |
| glutamyl-trna reductase | B0O44_104344 | Not Available | Negative | 2984584 - 2985873 | 48983.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

