Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter nutrimenti |
| Strain | strain DSM 27372 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1672028 bp
Thymine Count
1662865 bp
Guanine Count
1202051 bp
Cytosine Count
1178159 bp
Genome Length
5716991 bp
Protein-coding Genes
4924 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pimeloyl-acp methyl ester carboxylesterase | B0O44_104305 | Not Available | Negative | 2946453 - 2947343 | 33131.4 |
| hypothetical protein | B0O44_104306 | Not Available | Negative | 2947433 - 2948032 | 22783.6 |
| uncharacterized protein duf4932 | B0O44_104307 | Not Available | Positive | 2948165 - 2949394 | 47017.8 |
| doxx-like protein | B0O44_104308 | Not Available | Positive | 2949508 - 2949951 | 16087.0 |
| gamma-glutamylcyclotransferase (ggct)/aig2-like uncharacterized protein ytfp | B0O44_104309 | Not Available | Negative | 2949991 - 2950347 | 13248.6 |
| hd domain-containing protein | B0O44_104310 | Not Available | Negative | 2950427 - 2951077 | 24176.9 |
| arac-like dna-binding protein | B0O44_104311 | Not Available | Negative | 2951147 - 2952010 | 32590.0 |
| whg domain-containing protein | B0O44_104312 | Not Available | Negative | 2952084 - 2952590 | 19410.5 |
| dtdp-4-dehydrorhamnose reductase | B0O44_104313 | Not Available | Negative | 2952703 - 2953602 | 33320.0 |
| atp synthase f1 subcomplex beta subunit | B0O44_104314 | Not Available | Positive | 2953785 - 2955290 | 54329.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

