Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter nutrimenti |
| Strain | strain DSM 27372 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1672028 bp
Thymine Count
1662865 bp
Guanine Count
1202051 bp
Cytosine Count
1178159 bp
Genome Length
5716991 bp
Protein-coding Genes
4924 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| n-acetylmuramoyl-l-alanine amidase | B0O44_101248 | Not Available | Negative | 305430 - 306275 | 32104.6 |
| n-acetylmuramoyl-l-alanine amidase | B0O44_101249 | Not Available | Negative | 306318 - 307199 | 32858.5 |
| hypothetical protein | B0O44_101250 | Not Available | Positive | 307256 - 309916 | 99543.5 |
| nicotinamide-nucleotide amidase | B0O44_101251 | Not Available | Positive | 309927 - 311177 | 45922.1 |
| 2-oxoglutarate dehydrogenase e2 component (dihydrolipoamide succinyltransferase) | B0O44_101252 | Not Available | Positive | 311300 - 312631 | 48298.2 |
| homoserine dehydrogenase | B0O44_101253 | Not Available | Negative | 312682 - 313926 | 46633.7 |
| homoserine o-acetyltransferase | B0O44_101254 | Not Available | Negative | 313927 - 314985 | 39355.9 |
| o-acetylhomoserine (thiol)-lyase | B0O44_101255 | Not Available | Negative | 315005 - 316321 | 47611.3 |
| cystathionine gamma-synthase | B0O44_101257 | Not Available | Negative | 316884 - 317999 | 40558.8 |
| lipocalin-like protein | B0O44_101258 | Not Available | Positive | 318111 - 318611 | 17710.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

