Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter nutrimenti |
| Strain | strain DSM 27372 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1672028 bp
Thymine Count
1662865 bp
Guanine Count
1202051 bp
Cytosine Count
1178159 bp
Genome Length
5716991 bp
Protein-coding Genes
4924 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | B0O44_104295 | Not Available | Negative | 2940052 - 2940339 | 10239.5 |
| hypothetical protein | B0O44_104296 | Not Available | Negative | 2940418 - 2941398 | 37322.1 |
| rna polymerase sigma-70 factor (ecf subfamily) | B0O44_104297 | Not Available | Negative | 2941494 - 2942072 | 22012.9 |
| uncharacterized protein yhff | B0O44_104298 | Not Available | Negative | 2942249 - 2942731 | 18056.1 |
| uncharacterized protein ybjt (duf2867 family) | B0O44_104299 | Not Available | Negative | 2942737 - 2943606 | 31546.8 |
| hypothetical protein | B0O44_104300 | Not Available | Positive | 2943691 - 2943945 | 10136.7 |
| hypothetical protein | B0O44_104301 | Not Available | Negative | 2943936 - 2944700 | 27817.0 |
| dna-binding marr family transcriptional regulator | B0O44_104302 | Not Available | Negative | 2944705 - 2945205 | 19360.9 |
| hypothetical protein | B0O44_104303 | Not Available | Negative | 2945342 - 2945938 | 23353.0 |
| rna polymerase sigma-70 factor (ecf subfamily) | B0O44_104304 | Not Available | Negative | 2945928 - 2946443 | 20155.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

