Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter nutrimenti |
| Strain | strain DSM 27372 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1672028 bp
Thymine Count
1662865 bp
Guanine Count
1202051 bp
Cytosine Count
1178159 bp
Genome Length
5716991 bp
Protein-coding Genes
4924 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| peroxiredoxin | B0O44_104275 | Not Available | Negative | 2916109 - 2917635 | 57903.9 |
| susd-like starch-binding protein associating with outer membrane | B0O44_104276 | Not Available | Negative | 2917660 - 2919051 | 52635.6 |
| tonb-linked susc/raga family outer membrane protein | B0O44_104277 | Not Available | Negative | 2919066 - 2922578 | 130770.0 |
| fecr family protein | B0O44_104278 | Not Available | Negative | 2922777 - 2923955 | 43277.6 |
| plasmid stabilization system protein pare | B0O44_104279 | Not Available | Negative | 2924166 - 2924456 | 11490.8 |
| hypothetical protein | B0O44_104280 | Not Available | Negative | 2924450 - 2924665 | 8212.75 |
| tonb family protein | B0O44_104281 | Not Available | Negative | 2925061 - 2925840 | 28385.4 |
| hypothetical protein | B0O44_104282 | Not Available | Negative | 2926246 - 2926623 | 14653.5 |
| hypothetical protein | B0O44_104283 | Not Available | Negative | 2926626 - 2926856 | 8746.49 |
| hypothetical protein | B0O44_104284 | Not Available | Positive | 2927196 - 2927426 | 8775.79 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

