Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter nutrimenti |
| Strain | strain DSM 27372 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1672028 bp
Thymine Count
1662865 bp
Guanine Count
1202051 bp
Cytosine Count
1178159 bp
Genome Length
5716991 bp
Protein-coding Genes
4924 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna-binding narl/fixj family response regulator | B0O44_104255 | Not Available | Positive | 2900088 - 2900750 | 25019.9 |
| putative transposase/invertase (tigr01784 family) | B0O44_104256 | Not Available | Positive | 2900803 - 2901696 | 34491.7 |
| ribosomal-protein-alanine n-acetyltransferase | B0O44_104257 | Not Available | Positive | 2901830 - 2902360 | 19653.6 |
| uncharacterized protein duf4265 | B0O44_104258 | Not Available | Negative | 2902406 - 2902870 | 17915.0 |
| hypothetical protein | B0O44_104259 | Not Available | Positive | 2902984 - 2903274 | 11102.9 |
| hypothetical protein | B0O44_104260 | Not Available | Positive | 2903388 - 2903864 | 18453.2 |
| hypothetical protein | B0O44_104261 | Not Available | Negative | 2903896 - 2904372 | 18504.9 |
| hypothetical protein | B0O44_104262 | Not Available | Negative | 2904397 - 2904906 | 19885.1 |
| hypothetical protein | B0O44_104263 | Not Available | Positive | 2905075 - 2905581 | 19365.9 |
| hypothetical protein | B0O44_104264 | Not Available | Positive | 2905726 - 2905911 | 6984.47 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

