Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter nutrimenti |
| Strain | strain DSM 27372 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1672028 bp
Thymine Count
1662865 bp
Guanine Count
1202051 bp
Cytosine Count
1178159 bp
Genome Length
5716991 bp
Protein-coding Genes
4924 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | B0O44_104245 | Not Available | Positive | 2889394 - 2889840 | 17265.5 |
| 4-carboxymuconolactone decarboxylase | B0O44_104246 | Not Available | Negative | 2889882 - 2890295 | 15026.7 |
| iron complex outermembrane receptor protein | B0O44_104247 | Not Available | Positive | 2890855 - 2893014 | 79932.6 |
| catechol 2,3-dioxygenase-like lactoylglutathione lyase family enzyme | B0O44_104248 | Not Available | Positive | 2893095 - 2893475 | 14011.7 |
| uncharacterized protein duf3667 | B0O44_104249 | Not Available | Positive | 2893902 - 2894636 | 28408.5 |
| hypothetical protein | B0O44_104250 | Not Available | Positive | 2894643 - 2894834 | 7416.21 |
| hypothetical protein | B0O44_104251 | Not Available | Positive | 2894888 - 2895496 | 22572.8 |
| hypothetical protein | B0O44_104252 | Not Available | Negative | 2895727 - 2896557 | 31197.0 |
| hypothetical protein | B0O44_104253 | Not Available | Negative | 2896715 - 2897995 | 48588.6 |
| signal transduction histidine kinase | B0O44_104254 | Not Available | Positive | 2898161 - 2900083 | 73782.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

