Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter nutrimenti |
| Strain | strain DSM 27372 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1672028 bp
Thymine Count
1662865 bp
Guanine Count
1202051 bp
Cytosine Count
1178159 bp
Genome Length
5716991 bp
Protein-coding Genes
4924 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tonb family protein | B0O44_104225 | Not Available | Negative | 2873451 - 2874182 | 28271.9 |
| hypothetical protein | B0O44_104226 | Not Available | Positive | 2874382 - 2875467 | 41571.1 |
| signal transduction histidine kinase | B0O44_104227 | Not Available | Negative | 2875560 - 2876753 | 45101.0 |
| putative acetyltransferase | B0O44_104228 | Not Available | Negative | 2876874 - 2877398 | 20100.2 |
| ubiquinone/menaquinone biosynthesis c-methylase ubie | B0O44_104229 | Not Available | Positive | 2877540 - 2878172 | 24050.7 |
| hypothetical protein | B0O44_104230 | Not Available | Negative | 2878173 - 2878889 | 27963.6 |
| hypothetical protein | B0O44_104231 | Not Available | Negative | 2879148 - 2879804 | 24739.3 |
| rna polymerase sigma-70 factor (ecf subfamily) | B0O44_104232 | Not Available | Negative | 2879809 - 2880315 | 19941.0 |
| hypothetical protein | B0O44_104233 | Not Available | Negative | 2880461 - 2880769 | 12044.6 |
| uncharacterized protein duf3592 | B0O44_104234 | Not Available | Negative | 2880822 - 2881214 | 15019.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

