Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter nutrimenti |
| Strain | strain DSM 27372 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1672028 bp
Thymine Count
1662865 bp
Guanine Count
1202051 bp
Cytosine Count
1178159 bp
Genome Length
5716991 bp
Protein-coding Genes
4924 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| d-3-phosphoglycerate dehydrogenase | B0O44_101238 | Not Available | Positive | 297196 - 298146 | 33840.8 |
| uncharacterized protein (duf1015 family) | B0O44_101239 | Not Available | Positive | 298198 - 299442 | 47145.1 |
| hypothetical protein | B0O44_101240 | Not Available | Negative | 299435 - 299590 | 6051.7 |
| hypothetical protein | B0O44_101241 | Not Available | Negative | 299594 - 300115 | 20333.1 |
| hypothetical protein | B0O44_101242 | Not Available | Negative | 300175 - 300954 | 29367.7 |
| phosphate starvation-inducible protein phoh | B0O44_101243 | Not Available | Positive | 301057 - 302019 | 35735.6 |
| phosphoribosylaminoimidazole-succinocarboxamide synthase | B0O44_101244 | Not Available | Positive | 302030 - 303001 | 36493.5 |
| hypothetical protein | B0O44_101245 | Not Available | Positive | 303081 - 303470 | 14503.5 |
| ribonuclease z | B0O44_101246 | Not Available | Positive | 303470 - 304381 | 34514.7 |
| phospholipid/cholesterol/gamma-hch transport system substrate-binding protein | B0O44_101247 | Not Available | Negative | 304437 - 305390 | 34378.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

