Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter nutrimenti |
| Strain | strain DSM 27372 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1672028 bp
Thymine Count
1662865 bp
Guanine Count
1202051 bp
Cytosine Count
1178159 bp
Genome Length
5716991 bp
Protein-coding Genes
4924 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | B0O44_104175 | Not Available | Negative | 2817478 - 2818047 | 22108.4 |
| cobalt-zinc-cadmium efflux system membrane fusion protein | B0O44_104176 | Not Available | Negative | 2818294 - 2819433 | 42192.9 |
| cobalt-zinc-cadmium resistance protein czca | B0O44_104177 | Not Available | Negative | 2819447 - 2823808 | 160860.0 |
| hypothetical protein | B0O44_104178 | Not Available | Negative | 2823900 - 2824301 | 15343.0 |
| hypothetical protein | B0O44_104179 | Not Available | Negative | 2824357 - 2825430 | 41087.1 |
| putative transcriptional regulator | B0O44_104180 | Not Available | Positive | 2825536 - 2825910 | 14580.8 |
| beta-lactamase regulating signal transducer with metallopeptidase domain | B0O44_104181 | Not Available | Positive | 2825907 - 2827385 | 57304.2 |
| putative outer membrane starch-binding protein | B0O44_104182 | Not Available | Negative | 2827471 - 2829234 | 65968.5 |
| iron complex outermembrane receptor protein | B0O44_104183 | Not Available | Negative | 2829237 - 2832518 | 119445.0 |
| fecr family protein | B0O44_104184 | Not Available | Negative | 2832588 - 2833517 | 34827.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

