Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter nutrimenti |
| Strain | strain DSM 27372 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1672028 bp
Thymine Count
1662865 bp
Guanine Count
1202051 bp
Cytosine Count
1178159 bp
Genome Length
5716991 bp
Protein-coding Genes
4924 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna-binding ntrc family response regulator | B0O44_104165 | Not Available | Negative | 2807772 - 2809112 | 50348.2 |
| hypothetical protein | B0O44_104166 | Not Available | Negative | 2809185 - 2809667 | 18134.7 |
| hypothetical protein | B0O44_104167 | Not Available | Negative | 2809682 - 2810266 | 20976.3 |
| gtp-binding protein | B0O44_104168 | Not Available | Negative | 2810423 - 2811421 | 36034.6 |
| adenylate kinase | B0O44_104169 | Not Available | Negative | 2811487 - 2812056 | 21006.2 |
| mn2+/fe2+ nramp family transporter | B0O44_104170 | Not Available | Negative | 2812233 - 2813414 | 41159.2 |
| upf0271 protein | B0O44_104171 | Not Available | Negative | 2813411 - 2814169 | 27403.0 |
| antagonist of kipi | B0O44_104172 | Not Available | Negative | 2814162 - 2815118 | 34751.4 |
| inhibitor of kina | B0O44_104173 | Not Available | Negative | 2815108 - 2815821 | 26164.4 |
| emrb/qaca subfamily drug resistance transporter | B0O44_104174 | Not Available | Positive | 2815881 - 2817470 | 56209.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

