Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter nutrimenti |
| Strain | strain DSM 27372 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1672028 bp
Thymine Count
1662865 bp
Guanine Count
1202051 bp
Cytosine Count
1178159 bp
Genome Length
5716991 bp
Protein-coding Genes
4924 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| two-component system sensor histidine kinase kdpd | B0O44_104155 | Not Available | Negative | 2797041 - 2798168 | 42449.6 |
| putative ompl-like beta-barrel porin-2 | B0O44_104156 | Not Available | Negative | 2798183 - 2799253 | 39455.5 |
| k+-transporting atpase atpase c chain | B0O44_104157 | Not Available | Negative | 2799336 - 2799902 | 20326.7 |
| k+-transporting atpase atpase b chain | B0O44_104158 | Not Available | Negative | 2800018 - 2802048 | 71956.7 |
| k+-transporting atpase atpase a chain | B0O44_104159 | Not Available | Negative | 2802055 - 2803773 | 62045.5 |
| k+-transporting atpase kdpf subunit | B0O44_104160 | Not Available | Negative | 2803798 - 2804037 | 9160.56 |
| putative membrane protein | B0O44_104161 | Not Available | Negative | 2804149 - 2805081 | 35842.8 |
| hypothetical protein | B0O44_104162 | Not Available | Negative | 2805100 - 2805588 | 18636.8 |
| signal transduction histidine kinase | B0O44_104163 | Not Available | Negative | 2805682 - 2807046 | 51257.7 |
| dna-binding response ompr family regulator | B0O44_104164 | Not Available | Negative | 2807075 - 2807779 | 26239.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

