Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter nutrimenti |
| Strain | strain DSM 27372 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1672028 bp
Thymine Count
1662865 bp
Guanine Count
1202051 bp
Cytosine Count
1178159 bp
Genome Length
5716991 bp
Protein-coding Genes
4924 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycine c-acetyltransferase | B0O44_104135 | Not Available | Negative | 2772377 - 2773615 | 46139.9 |
| cell division protein ftsz | B0O44_104136 | Not Available | Negative | 2773784 - 2775418 | 59661.9 |
| cell division protein ftsa | B0O44_104137 | Not Available | Negative | 2775548 - 2776909 | 49499.1 |
| cell division protein ftsq | B0O44_104138 | Not Available | Negative | 2776940 - 2777977 | 38821.6 |
| udp-n-acetylmuramate--l-alanine ligase | B0O44_104139 | Not Available | Negative | 2777970 - 2779325 | 50083.2 |
| udp-n-acetylglucosamine-n- acetylmuramylpentapeptide n-acetylglucosamine transferase | B0O44_104140 | Not Available | Negative | 2779328 - 2780437 | 39735.0 |
| cell division protein ftsw | B0O44_104141 | Not Available | Negative | 2780450 - 2781643 | 43184.6 |
| udp-n-acetylmuramoylalanine--d-glutamate ligase | B0O44_104142 | Not Available | Negative | 2781647 - 2782990 | 49785.8 |
| phospho-n-acetylmuramoyl-pentapeptide- transferase | B0O44_104143 | Not Available | Negative | 2782990 - 2784237 | 46386.9 |
| udp-n-acetylmuramoylalanyl-d-glutamate--2, 6-diaminopimelate ligase | B0O44_104144 | Not Available | Negative | 2784237 - 2785694 | 53253.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

