Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter nutrimenti |
| Strain | strain DSM 27372 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1672028 bp
Thymine Count
1662865 bp
Guanine Count
1202051 bp
Cytosine Count
1178159 bp
Genome Length
5716991 bp
Protein-coding Genes
4924 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative membrane protein yeaq/ymge (transglycosylase-associated protein family) | B0O44_104125 | Not Available | Negative | 2759231 - 2759476 | 8456.82 |
| tonb-dependent receptor-like protein | B0O44_104126 | Not Available | Negative | 2759529 - 2762414 | 105196.0 |
| penicillin amidase | B0O44_104127 | Not Available | Positive | 2762606 - 2765041 | 91733.3 |
| hypothetical protein | B0O44_104128 | Not Available | Positive | 2765045 - 2765395 | 12800.5 |
| acyl-protein synthetase luxe | B0O44_104129 | Not Available | Positive | 2765399 - 2766397 | 37515.9 |
| tyrosyl-trna synthetase | B0O44_104130 | Not Available | Negative | 2766738 - 2768024 | 48267.7 |
| acyl carrier protein phosphodiesterase | B0O44_104131 | Not Available | Positive | 2768222 - 2768893 | 26096.6 |
| dna ligase (nad+) | B0O44_104132 | Not Available | Positive | 2768962 - 2770947 | 74795.6 |
| 4-hydroxy-tetrahydrodipicolinate synthase | B0O44_104133 | Not Available | Positive | 2770958 - 2771839 | 31766.2 |
| hypothetical protein | B0O44_104134 | Not Available | Negative | 2771899 - 2772084 | 6732.11 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

