Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter nutrimenti |
| Strain | strain DSM 27372 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1672028 bp
Thymine Count
1662865 bp
Guanine Count
1202051 bp
Cytosine Count
1178159 bp
Genome Length
5716991 bp
Protein-coding Genes
4924 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| regulator of nucleoside diphosphate kinase | B0O44_104115 | Not Available | Negative | 2744447 - 2744851 | 14968.3 |
| ahpc/tsa family protein | B0O44_104116 | Not Available | Negative | 2745313 - 2745786 | 17675.6 |
| hypothetical protein | B0O44_104117 | Not Available | Positive | 2745997 - 2746359 | 13743.7 |
| histidine kinase | B0O44_104118 | Not Available | Positive | 2746510 - 2747613 | 42942.3 |
| lyttr family two component transcriptional regulator | B0O44_104119 | Not Available | Positive | 2747624 - 2748382 | 29204.2 |
| membrane fusion protein (multidrug efflux system) | B0O44_104120 | Not Available | Positive | 2748575 - 2749765 | 42466.1 |
| hydrophobe/amphiphile efflux-1 (hae1) family protein | B0O44_104121 | Not Available | Positive | 2749791 - 2752931 | 114036.0 |
| nodt family efflux transporter outer membrane factor (omf) lipoprotein | B0O44_104122 | Not Available | Positive | 2752942 - 2754354 | 51331.6 |
| 1,4-alpha-glucan branching enzyme | B0O44_104123 | Not Available | Negative | 2754591 - 2756537 | 74968.8 |
| alpha-glucosidase | B0O44_104124 | Not Available | Negative | 2756571 - 2759042 | 96500.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

