Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter nutrimenti |
| Strain | strain DSM 27372 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1672028 bp
Thymine Count
1662865 bp
Guanine Count
1202051 bp
Cytosine Count
1178159 bp
Genome Length
5716991 bp
Protein-coding Genes
4924 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| n-acetylglucosamine kinase-like badf-type atpase | B0O44_104105 | Not Available | Positive | 2734633 - 2735496 | 32329.1 |
| 8-oxo-dgtp diphosphatase | B0O44_104106 | Not Available | Negative | 2735554 - 2736243 | 26701.8 |
| 6-phosphofructokinase | B0O44_104107 | Not Available | Positive | 2736362 - 2737348 | 35263.4 |
| hypothetical protein | B0O44_104108 | Not Available | Positive | 2737355 - 2738197 | 31686.3 |
| glyceraldehyde 3-phosphate dehydrogenase | B0O44_104109 | Not Available | Positive | 2738203 - 2739204 | 35973.0 |
| hypothetical protein | B0O44_104110 | Not Available | Negative | 2739304 - 2740653 | 48464.9 |
| ankyrin repeat protein | B0O44_104111 | Not Available | Negative | 2740655 - 2741845 | 44674.7 |
| trna (cmo5u34)-methyltransferase | B0O44_104112 | Not Available | Negative | 2741898 - 2742635 | 27250.8 |
| dna-binding transcriptional lysr family regulator | B0O44_104113 | Not Available | Positive | 2742725 - 2743621 | 34632.1 |
| methionyl aminopeptidase | B0O44_104114 | Not Available | Negative | 2743630 - 2744388 | 27466.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

