Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter nutrimenti |
| Strain | strain DSM 27372 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1672028 bp
Thymine Count
1662865 bp
Guanine Count
1202051 bp
Cytosine Count
1178159 bp
Genome Length
5716991 bp
Protein-coding Genes
4924 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| acyl-coa thioester hydrolase | B0O44_101228 | Not Available | Negative | 286933 - 287337 | 15837.3 |
| upf0755 protein | B0O44_101229 | Not Available | Negative | 287340 - 288395 | 40251.8 |
| beta-lactam-binding protein with pasta domain | B0O44_101230 | Not Available | Negative | 288407 - 289189 | 28413.6 |
| d-alanine-d-alanine ligase | B0O44_101231 | Not Available | Positive | 289372 - 290358 | 36540.0 |
| putative mate family efflux protein | B0O44_101232 | Not Available | Negative | 290407 - 291834 | 51207.2 |
| acyl-coa thioester hydrolase/thioesterase-3 | B0O44_101233 | Not Available | Negative | 292057 - 292476 | 16242.6 |
| small subunit ribosomal protein s15 | B0O44_101234 | Not Available | Positive | 292596 - 292874 | 10748.3 |
| polyribonucleotide nucleotidyltransferase | B0O44_101235 | Not Available | Positive | 292991 - 295138 | 77909.9 |
| ribulose-phosphate 3-epimerase | B0O44_101236 | Not Available | Positive | 295273 - 295944 | 24134.4 |
| phosphoserine aminotransferase | B0O44_101237 | Not Available | Positive | 296122 - 297186 | 39100.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

