Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter nutrimenti |
| Strain | strain DSM 27372 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1672028 bp
Thymine Count
1662865 bp
Guanine Count
1202051 bp
Cytosine Count
1178159 bp
Genome Length
5716991 bp
Protein-coding Genes
4924 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 4-hydroxyphenylpyruvate dioxygenase | B0O44_10495 | Not Available | Positive | 2723954 - 2725084 | 42470.2 |
| membrane protein | B0O44_10496 | Not Available | Positive | 2725229 - 2726161 | 35535.8 |
| hypothetical protein | B0O44_10497 | Not Available | Negative | 2726184 - 2726459 | 10526.8 |
| outer membrane protein with beta-barrel domain | B0O44_10498 | Not Available | Negative | 2726593 - 2727180 | 20964.3 |
| signal transduction histidine kinase | B0O44_10499 | Not Available | Positive | 2727332 - 2729107 | 67747.2 |
| hypothetical protein | B0O44_104100 | Not Available | Negative | 2729127 - 2729429 | 11411.5 |
| tetratricopeptide repeat protein | B0O44_104101 | Not Available | Positive | 2729600 - 2730778 | 44706.8 |
| riboflavin synthase alpha chain | B0O44_104102 | Not Available | Negative | 2730768 - 2731364 | 21867.0 |
| acetyl-coa carboxylase biotin carboxylase subunit | B0O44_104103 | Not Available | Negative | 2731378 - 2732853 | 54242.3 |
| l-threonine aldolase | B0O44_104104 | Not Available | Negative | 2732899 - 2733918 | 37013.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

