Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter nutrimenti |
| Strain | strain DSM 27372 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1672028 bp
Thymine Count
1662865 bp
Guanine Count
1202051 bp
Cytosine Count
1178159 bp
Genome Length
5716991 bp
Protein-coding Genes
4924 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc-2 type transport system atp-binding protein | B0O44_10485 | Not Available | Negative | 2713438 - 2714145 | 25828.7 |
| glycyl-trna synthetase | B0O44_10486 | Not Available | Positive | 2714262 - 2715743 | 57435.3 |
| hypothetical protein | B0O44_10487 | Not Available | Positive | 2716045 - 2716740 | 26735.9 |
| putative flippase gtra | B0O44_10488 | Not Available | Positive | 2716759 - 2717253 | 18605.1 |
| phenylalanine-4-hydroxylase | B0O44_10489 | Not Available | Positive | 2717406 - 2719193 | 67349.1 |
| short-subunit dehydrogenase | B0O44_10490 | Not Available | Positive | 2719194 - 2719895 | 25097.6 |
| nlpc/p60 family protein | B0O44_10491 | Not Available | Positive | 2719974 - 2720492 | 19179.3 |
| flavin reductase (dim6/ntab) family nadh-fmn oxidoreductase rutf | B0O44_10492 | Not Available | Negative | 2720489 - 2721382 | 32582.5 |
| fumarylacetoacetate (faa) hydrolase | B0O44_10493 | Not Available | Negative | 2721382 - 2722377 | 36589.8 |
| homogentisate 1,2-dioxygenase | B0O44_10494 | Not Available | Positive | 2722737 - 2723903 | 44750.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

